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Genome-wide homozygosity in Tutorial_SNP - Tutorial_SNP_Analysis

55712 sites Max homozygosity score: 3000

Click on a chromosome to zoom in.

Broad – use this when you expect some genetic heterogeneity

scorechrfrom (bp)to (bp)length (bp)build 37
3000729483759369015797417821RegionGenotypes
21461740963904450340024070099RegionGenotypes
20171739598822406727391073918RegionGenotypes
1812173916615339534036367884RegionGenotypes
1800841807750492892577481508RegionGenotypes

Narrow – use this when all patients are from the same family

scorechrfrom (bp)to (bp)length (bp)build 37
3000729944869363425876397719RegionGenotypes
240073633896736547689208723RegionGenotypes
21461740963904450340024070099RegionGenotypes
20171739598822406727391073918RegionGenotypes
184472948375929648108164350RegionGenotypes
1812173916615339534036367884RegionGenotypes
1800841807750492892577481508RegionGenotypes
180073649059836901579410982RegionGenotypes

Options and Exports

Change threshold
Call GeneDistiller build 37
/
Create a BED file build 37
/
Homozyosity scores
Retrieve

Analysis settings

project_nameTutorial_SNP (Change name)
analysis_nameTutorial_SNP_Analysis (Change name)
max_block_length6
max_score3000
owner_loginmelvo98
lower_limit0
date2021-01-06 00:00:00
casesNA06993,NA07019,NA07034,NA07056,NA07357
controlsNA10835,NA10846,NA10854