HomozgosityMapper pedigree

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Genome-wide homozygosity in Carpenter - testx

55708 sites Max homozygosity score: 600

Click on a chromosome to zoom in.

Broad – use this when you expect some genetic heterogeneity

score	chr	from (bp)	to (bp)	length (bp)	build 37
600	16	33535916	49123518	15587603	Region	Genotypes
600	2	85933367	100279693	14346327	Region	Genotypes
600	18	11812228	20462455	8650228	Region	Genotypes
600	8	40722829	49289257	8566429	Region	Genotypes
600	12	32476906	39422793	6945888	Region	Genotypes
600	7	148524752	154579292	6054541	Region	Genotypes
567	5	44338759	50178160	5839402	Region	Genotypes
527	7	70249234	75590808	5341575	Region	Genotypes
522	9	126275713	131516838	5241126	Region	Genotypes
512	19	23517046	28676721	5159676	Region	Genotypes
475	12	49255798	54072819	4817022	Region	Genotypes
471	1	24411988	29345027	4933040	Region	Genotypes
460	17	39154763	43762594	4607832	Region	Genotypes
446	10	73181856	77803747	4621892	Region	Genotypes
441	4	113115	4522615	4409501	Region	Genotypes
414	6	58344154	62534498	4190345	Region	Genotypes
382	11	37182945	41096261	3913317	Region	Genotypes
368	22	18407468	22670103	4262636	Region	Genotypes

Narrow – use this when all patients are from the same family

score	chr	from (bp)	to (bp)	length (bp)	build 37
600	16	33535916	49123518	15587603	Region	Genotypes
600	2	85933367	100279693	14346327	Region	Genotypes
600	18	11812228	20462455	8650228	Region	Genotypes
600	8	40722829	49289257	8566429	Region	Genotypes
600	12	32476906	39422793	6945888	Region	Genotypes
600	7	148524752	154579292	6054541	Region	Genotypes
567	5	44338759	50178160	5839402	Region	Genotypes
527	7	70249234	75590808	5341575	Region	Genotypes
522	9	126275713	131516838	5241126	Region	Genotypes
512	19	23517046	28676721	5159676	Region	Genotypes
475	12	49255798	54072819	4817022	Region	Genotypes
471	1	24411988	29345027	4933040	Region	Genotypes
460	17	39154763	43762594	4607832	Region	Genotypes
446	10	73181856	77803747	4621892	Region	Genotypes
441	4	113115	4522615	4409501	Region	Genotypes
414	6	58344154	62534498	4190345	Region	Genotypes
382	11	37182945	41096261	3913317	Region	Genotypes
368	22	18407468	22670103	4262636	Region	Genotypes

Homozyosity scores

Analysis settings

project_name	Carpenter (Change name)
analysis_name	testx (Change name)
max_block_length	6
max_score	600
owner_login	tutorial
lower_limit	0
date	2024-08-20 00:00:00
cases	3538
controls	3539